Package: maskRangeR 1.1

maskRangeR: Mask Species Geographic Ranges

Mask ranges based on expert knowledge or remote sensing layers. These tools can be combined to quantitatively and reproducibly generate a new map or to update an existing map. Methods include expert opinion and data-driven tools to generate thresholds for binary masks.

Authors:Cory Merow [aut, cre], Peter J. Galante [aut], Jamie M. Kass [aut], Cecina Babich Morrow [aut], Valentina Grisales Betancur [aut]

maskRangeR_1.1.tar.gz
maskRangeR_1.1.zip(r-4.5)maskRangeR_1.1.zip(r-4.4)maskRangeR_1.1.zip(r-4.3)
maskRangeR_1.1.tgz(r-4.4-any)maskRangeR_1.1.tgz(r-4.3-any)
maskRangeR_1.1.tar.gz(r-4.5-noble)maskRangeR_1.1.tar.gz(r-4.4-noble)
maskRangeR_1.1.tgz(r-4.4-emscripten)maskRangeR_1.1.tgz(r-4.3-emscripten)
maskRangeR.pdf |maskRangeR.html✨
maskRangeR/json (API)

# Install 'maskRangeR' in R:

install.packages('maskRangeR', repos = c('https://cmerow.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.48 score 6 scripts 181 downloads 10 exports 28 dependencies

Last updated 2 years agofrom:683540dcdb. Checks:OK: 3 NOTE: 4. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Oct 23 2024
R-4.5-win	NOTE	Oct 23 2024
R-4.5-linux	NOTE	Oct 23 2024
R-4.4-win	NOTE	Oct 23 2024
R-4.4-mac	NOTE	Oct 23 2024
R-4.3-win	OK	Oct 23 2024
R-4.3-mac	OK	Oct 23 2024

Exports:annotate continuousMask cropResampleTrim focalCompare lotsOfMasks manyMaskSensitivity maskRanger rangeSVM rangeSVM_predict thresholdSensitivity

Dependencies:class cli cpp11 dplyr e1071 fansi generics glue lattice lifecycle lubridate magrittr MASS pillar pkgconfig proxy R6 raster Rcpp rlang sp terra tibble tidyselect timechange utf8 vctrs withr

Function Directory

Cory Merow

Rendered fromfunctionDirectory.Rmdusingknitr::rmarkdownon Oct 23 2024.

Last update: 2021-11-10
Started: 2021-11-10

maskRangeR: Improving spatial and temporal accuracy of species distribution models

Cory Merow, Peter J. Galante, Cecina Babich Morrow, Jamie M. Kass, Alex Moore, Valentina Grisales-Betancur, Beth Gerstner, Jorge Velasquez, Robert P. Anderson, Mary E. Blair

Rendered frommaskRanger_PseudoVignette.Rmdusingknitr::rmarkdownon Oct 23 2024.

Last update: 2021-11-10
Started: 2021-11-10

Version Updates

Cory Merow

Rendered fromVersion_Updates.Rmdusingknitr::rmarkdownon Oct 23 2024.

Last update: 2021-11-10
Started: 2021-11-10

Help page	Topics
Annotate point data with rasters based on matching dates.	annotate
Update a binary raster (species range map) to continuous values that describe the proportion of cell that is suitable or the quality of the cell.	continuousMask
Line two rasters or stacks or lists of rasters	cropResampleTrim
Generate layers based on different focal windows	focalCompare
Generate and apply multiple masks to a map	lotsOfMasks
Sensitivity testing for masks	manyMaskSensitivity
Make a matrix of modeling decisions to be used to specify clipping rules	maskRanger
Classify species ranges based on occurrence coordinates and SDM scores.	rangeSVM
Generate a raster based on predictions of SVM model with values corresponding to the species.	rangeSVM_predict
Sensitivity testing for thresholds	thresholdSensitivity

Package: maskRangeR 1.1

maskRangeR: Mask Species Geographic Ranges

Function Directory

maskRangeR: Improving spatial and temporal accuracy of species distribution models

Version Updates

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)